PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_07515
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family ARR-B
Protein Properties Length: 496aa    MW: 57022.3 Da    PI: 6.7888
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_07515genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like86.82.1e-27316370156
     G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 
                 k +++WtpeLH+rFv+a+eqL G+++A+P++ilelmkv+gLt+++v+SHLQk+R++
  PEQU_07515 316 KMKVDWTPELHKRFVKAIEQL-GIDQAIPSKILELMKVDGLTRHNVASHLQKFRMH 370
                 5689*****************.********************************96 PP
2Response_reg36.23.2e-13201251109
                   EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH..HHHHESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS
  Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealell..kekdpDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 
                   +l++d++++ +   +  le  +y  v ++ +geeale +  k++++++ ++ +  +g  G+++l+  +     +p iv++     +++ +++ +Ga 
    PEQU_07515  20 ILLCDEDEDSAAETKLKLEAMDY-MVHSFCKGEEALEAVlrKAENYHIAIVEVTASGPAGFNFLEMVKD----IPTIVISKVHCLNTVMKCIALGAA 111
                   899********************.***************666666*********************997....78*****9999************* PP

                   EEEESS--HHHHHH CS
  Response_reg  96 dflsKpfdpeelvk 109
                   +f+ Kp ++e+l++
    PEQU_07515 112 EFVQKPLSEEKLRN 125
                   ***********987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.40.50.23006.4E-1816138No hitNo description
SuperFamilySSF521729.96E-1816135IPR011006CheY-like superfamily
SMARTSM004482.2E-818127IPR001789Signal transduction response regulator, receiver domain
PROSITE profilePS5011020.28519131IPR001789Signal transduction response regulator, receiver domain
PfamPF000721.1E-1020126IPR001789Signal transduction response regulator, receiver domain
CDDcd001563.24E-1021131No hitNo description
PROSITE profilePS5129414.943313372IPR017930Myb domain
SuperFamilySSF466892.87E-18314373IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.8E-26314372IPR009057Homeodomain-like
TIGRFAMsTIGR015577.0E-25316371IPR006447Myb domain, plants
PfamPF002497.2E-7319367IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 496 aa     Download sequence    Send to blast
MSCSADDLSV WKDFPKGLRI LLCDEDEDSA AETKLKLEAM DYMVHSFCKG EEALEAVLRK  60
AENYHIAIVE VTASGPAGFN FLEMVKDIPT IVISKVHCLN TVMKCIALGA AEFVQKPLSE  120
EKLRNIWQHI IHKAFNAGRN AISMPLKPVK ETVSSALQMQ RNFSELKIEI PPQFFDMEQE  180
HEGMNIKEKE NDKFSESSTP QLIKGGRLRE DKVFHDQTEC LEKDCSVGDT ELSETQKCNL  240
SGTKFVDNAC NSFTAAVNSE EAAAEVELDS AKEISLNVLS RENAENEDSD LENPTKEKPF  300
VHTSSCLNRV RGSRRKMKVD WTPELHKRFV KAIEQLGIDQ AIPSKILELM KVDGLTRHNV  360
ASHLQKFRMH KRHILPKEDD RRWQLHADPS QKGYLQKPVM AFPPYHSNYI IPPSQPYPIW  420
PHQTYHLPHV QMWRHSGFPS WPPPPENWPT NIYPEVFVTI SFISQTYSPF YCIKCHFNLR  480
IYRSFKILPF HFKIEL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5lxu_A4e-16321370655Transcription factor LUX
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020577587.10.0two-component response regulator-like APRR2 isoform X1
TrEMBLA0A2I0VFH90.0A0A2I0VFH9_9ASPA; Two-component response regulator-like APRR2
STRINGXP_008784680.11e-161(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP2076367
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18020.51e-102ARR-B family protein