PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_07874
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family C2H2
Protein Properties Length: 147aa    MW: 16145.8 Da    PI: 10.3701
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_07874genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.70.000772949121
                EEETTTTEEESSHHHHHHHHH CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHir 21
                ++C+ C+  ++++++L++H +
  PEQU_07874 29 FTCEVCKIDCNSQETLNTHKM 49
                89*****************86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576675.6E-102161No hitNo description
SMARTSM004510.00392660IPR003604Zinc finger, U1-type
PfamPF128742.1E-72953No hitNo description
SMARTSM003550.452953IPR015880Zinc finger, C2H2-like
PROSITE patternPS0002803153IPR007087Zinc finger, C2H2
SuperFamilySSF576671.51E-9110143No hitNo description
SMARTSM003555.2112136IPR015880Zinc finger, C2H2-like
PfamPF128742.3E-8114136No hitNo description
PROSITE patternPS000280114136IPR007087Zinc finger, C2H2
SMARTSM004510.0023114143IPR003604Zinc finger, U1-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 147 aa     Download sequence    Send to blast
MSYAKKSAAL RPFNIATSFT KAAKPVQTFT CEVCKIDCNS QETLNTHKMG KKHKAKLQKL  60
QEKITPKPSV ASSGHNETAK PESVKKKPSG KEGVQVKKEK VVQGGAAEEA IMICSLCDIV  120
CNSKSVYESH ITGRKHLSMI KKQETRV
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020581524.11e-101zinc finger protein 346-like
TrEMBLA0A2I0X5T22e-55A0A2I0X5T2_9ASPA; Uncharacterized protein
STRINGXP_008776992.12e-36(Phoenix dactylifera)