PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PEQU_07958

Organism

Phalaenopsis equestris

Taxonomic ID

78828

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis

Family

FAR1

Protein Properties

Length: 181aa MW: 19444.2 Da PI: 8.2277

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PEQU_07958	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	26.7	1.8e-08	58	102	3	47
FAR1 3 YneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk 47 Y+ YA+++GF+vrk++s ++++ + ++fvC k g+++e k++ PEQU_07958 58 YCLYAHHIGFTVRKEHSGFWPNSKKLKIKDFVCGKAGFKKELKDT 102 999************************************998876 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	3.4E-6	58	106	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 181 aa Download sequence Send to blast
MRRNDAIIEG GTVKEDRDSA VCFDSKEEMG RASILHSPEA EKLLHAVVHN EKEAYEQYCL 60 YAHHIGFTVR KEHSGFWPNS KKLKIKDFVC GKAGFKKELK DTITPEILSF HPVTAAPCSN 120 QLGFLVPKHS LASAANIDIY KGGIGACTGG TYTTNRKVVL VIGEVAAVSG SSGVAAVAAI 180 G

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP1212	5	87