PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_08069
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family FAR1
Protein Properties Length: 277aa    MW: 32183.6 Da    PI: 9.0903
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_08069genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR154.15.2e-1722107288
        FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 
                  Y++YA++ GFsvrk++     ++++ ++++fvC +  +++e k + +  + +r+ tr gC  ++  + + +g+w v+k+ + HnH+
  PEQU_08069  22 IYCAYAHHSGFSVRKEHGAFWPNSRNLKTKDFVCGRASFKKELKIT-QIVKYKRVDTRSGCPTMICYSIDVEGNWTVKKFIESHNHS 107
                 7********************9********************9988.88889**********************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031013.6E-1522108IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    Send to blast
KDQSTNLLLE TVVHNDKEAY KIYCAYAHHS GFSVRKEHGA FWPNSRNLKT KDFVCGRASF  60
KKELKITQIV KYKRVDTRSG CPTMICYSID VEGNWTVKKF IESHNHSANP GDKHLLRLSR  120
KYKQVNAEVL RSMTQSEIRP RETFNFLATK VGGVENLECT KIDVFNFIQI DRRCRIENDD  180
VNALLQLFTE RCAEDSLFQW DFEIDESGRL KLFFFFKPQR SESTNNICHG VAKPTSSITD  240
CFLGLKQVMR TWRRNEKHED YKSDQSAITP VAKTALH
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020598366.11e-109putative protein FAR1-RELATED SEQUENCE 10
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP1212587
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.12e-14FAR1-related sequence 5