PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_08206
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family GATA
Protein Properties Length: 256aa    MW: 28115.5 Da    PI: 7.2856
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_08206genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA50.13.8e-16196233136
        GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkglk 36 
                 C++Cg +   Tp++Rrgp+g++tLCnaCGl ++ kg++
  PEQU_08206 196 CHHCGISAksTPMMRRGPNGPRTLCNACGLVWANKGTM 233
                 *****77777*************************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5132015.5766095IPR010399Tify domain
SMARTSM009791.1E-126095IPR010399Tify domain
PfamPF062003.2E-136394IPR010399Tify domain
PROSITE profilePS5101713.473122164IPR010402CCT domain
PfamPF062034.1E-16122164IPR010402CCT domain
PROSITE profilePS5011410.475190247IPR000679Zinc finger, GATA-type
SMARTSM004012.5E-13190243IPR000679Zinc finger, GATA-type
Gene3DG3DSA:3.30.50.101.6E-15195237IPR013088Zinc finger, NHR/GATA-type
SuperFamilySSF577165.23E-12195247No hitNo description
PfamPF003207.5E-14196233IPR000679Zinc finger, GATA-type
PROSITE patternPS003440196223IPR000679Zinc finger, GATA-type
CDDcd002021.07E-16196249No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0005515Molecular Functionprotein binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 256 aa     Download sequence    Send to blast
MGSDGQGILR YAREHEENDE GGVGHGMGED HDGMMESEEM EGDGPSDPGH PGDPQGMIVP  60
HGGSNQLTLS FQGEVYVFDS VSPEKVQAVL LLLGGREIST GLAAFPSTAD LTTKQRSTLP  120
HRVASLMRFR EKRKERNFDK KIRYTVRKEV ALRMQRSRGQ FISSKSKSED ATSDVNAWTN  180
QHWDSVEKQP PSAADCHHCG ISAKSTPMMR RGPNGPRTLC NACGLVWANK GTMRDLSKNP  240
STPIQTRLPE AKDLVS
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. {ECO:0000250|UniProtKB:Q8LAU9}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00369DAPTransfer from AT3G21175Download
Motif logo
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By abscisic acid (ABA), and drought and salt stresses. Down-regulated by jasmonate and wounding. {ECO:0000269|PubMed:19618278}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020572684.10.0GATA transcription factor 20-like
SwissprotQ5Z4U55e-94GAT20_ORYSJ; GATA transcription factor 20
TrEMBLA0A2I0WLX71e-164A0A2I0WLX7_9ASPA; GATA transcription factor 28
STRINGXP_008799475.11e-115(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP43253868
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21175.21e-77ZIM-like 1