PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_08299
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family bHLH
Protein Properties Length: 257aa    MW: 29024.8 Da    PI: 8.4615
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_08299genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.18.7e-10171213855
                 HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 + ++RR+ri +++  L+ l+P+      +K++ +++LekA+ Y+k Lq
  PEQU_08299 171 AAKNRRERISERLKILQALIPNG-----TKVDLVTMLEKAISYVKFLQ 213
                 569******************97.....8******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.280.108.6E-12162221IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000834.61E-11162217No hitNo description
PROSITE profilePS5088814.697163212IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.66E-13165223IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.6E-11169218IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000107.5E-7173213IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 257 aa     Download sequence    Send to blast
MALAKERGIY TPQSPAFIQG FDTSSLSRYD FLPDNQIFRN PNTFLFESSD FAFHESRPLI  60
NFKPSGADHH QPAIYSPPVL SFERDVDYKE NSVSWIDSME DENDTIDRLR WKNCDANCFR  120
NEGDGFGKMT GLSKGANFMG CEMRASKKHG GGMKRQAKAK MSSSKDIQSV AAKNRRERIS  180
ERLKILQALI PNGTKVDLVT MLEKAISYVK FLQLQVKVLA TDEFWPAQGE RAPDISQVKE  240
AIEAILSSHR ERNSSSS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020572644.10.0putative transcription factor bHLH086
TrEMBLA0A2I0VLJ91e-112A0A2I0VLJ9_9ASPA; Transcription factor bHLH086
STRINGcassava4.1_031371m1e-52(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP141238117
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66470.11e-48ROOT HAIR DEFECTIVE6