PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_08374
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family NAC
Protein Properties Length: 156aa    MW: 18288.9 Da    PI: 9.8616
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_08374genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM163.95.7e-5191361128
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97 
                 lppGf FhPtd el+++yL++k +g k+++ +vi+e+diyk ePwdLp+  ++ + +++w+fF+++dkky++g r+nrat++gyWk+tgkd+++ s ++
  PEQU_08374   9 LPPGFGFHPTDVELISHYLRRKNRGLKIDF-DVIPELDIYKREPWDLPAccQIPTMDSKWHFFTSHDKKYPNGLRSNRATEAGYWKSTGKDRNIRS-HN 105
                 79****************************.9****************6346666889**************************************.99 PP

         NAM  98 elvglkktLvfykgrapkgektdWvmheyrl 128
                 +++g+kktLvf++gr p+g++tdW+mhey +
  PEQU_08374 106 QVIGTKKTLVFHEGRPPRGKRTDWIMHEYYM 136
                 9****************************76 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019416.67E-544141IPR003441NAC domain
PROSITE profilePS5100549.9529153IPR003441NAC domain
PfamPF023652.4E-2510135IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 156 aa     Download sequence    Send to blast
MEALKAISLP PGFGFHPTDV ELISHYLRRK NRGLKIDFDV IPELDIYKRE PWDLPACCQI  60
PTMDSKWHFF TSHDKKYPNG LRSNRATEAG YWKSTGKDRN IRSHNQVIGT KKTLVFHEGR  120
PPRGKRTDWI MHEYYMDEKE SKTSSQIKVL YFGGFL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A1e-4421368140Stress-induced transcription factor NAC1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor involved in stress response. {ECO:0000250|UniProtKB:Q7F2L3}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by salt and cold stresses. {ECO:0000269|PubMed:18813954}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020572642.11e-108NAC domain-containing protein 74-like
SwissprotQ7GCL76e-74NAC74_ORYSJ; NAC domain-containing protein 74
TrEMBLA0A2I0VXF73e-91A0A2I0VXF7_9ASPA; NAC domain-containing protein 74
STRINGXP_008784959.12e-81(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP75603847
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G17730.12e-60NAC domain containing protein 57
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]