PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PEQU_08415

Organism

Phalaenopsis equestris

Taxonomic ID

78828

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis

Family

G2-like

Protein Properties

Length: 146aa MW: 16499.1 Da PI: 4.8859

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PEQU_08415	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	91.7	6.1e-29	71	120	2	51
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 prlrWtpeLH +Fv+ave+LGG+e+AtPk +l++m+v gL+++hvkSHLQ PEQU_08415 71 PRLRWTPELHLSFVHAVERLGGHERATPKLVLQMMNVRGLSIAHVKSHLQ 120 8************************************************* PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	1.2E-26	67	120	IPR009057	Homeodomain-like
SuperFamily	SSF46689	1.79E-13	69	121	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	4.4E-20	71	121	IPR006447	Myb domain, plants
Pfam	PF00249	3.8E-9	72	120	IPR001005	SANT/Myb domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 146 aa Download sequence Send to blast
MADGGEEDDE DNNGSTTEVL EEGGESYSYN NNSEDDGNNN DGGSSKSMED GEENRDRRSA 60 AVRQYVRSKM PRLRWTPELH LSFVHAVERL GGHERATPKL VLQMMNVRGL SIAHVKSHLQ 120 VKTPTYELIH ENTLLIYISS PKIFFF

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
6j4k_A	6e-18	72	120	4	52	Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B	6e-18	72	120	4	52	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A	5e-18	72	120	3	51	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B	5e-18	72	120	3	51	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C	5e-18	72	120	3	51	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D	5e-18	72	120	3	51	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A	6e-18	72	120	4	52	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C	6e-18	72	120	4	52	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D	6e-18	72	120	4	52	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F	6e-18	72	120	4	52	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H	6e-18	72	120	4	52	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J	6e-18	72	120	4	52	Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020572606.1	2e-79	uncharacterized protein LOC110019324
TrEMBL	A0A2I0VD15	6e-40	A0A2I0VD15_9ASPA; Myb family transcription factor
STRING	Aquca_021_00207.1	2e-36	(Aquilegia coerulea)
STRING	XP_007159455.1	4e-36	(Phaseolus vulgaris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP4408	36	71

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42660.1	6e-32	G2-like family protein