PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_08753
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family B3
Protein Properties Length: 172aa    MW: 19888.3 Da    PI: 4.2198
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_08753genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B360.52.9e-1946139190
                 EEEE-..-HHHHTT-EE--HHH.HTT...---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeeh...ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sef 90 
                 f  vlt+sdv + g+l+lp + a ++     +++++  l+++d++ r W ++++y+++ g+yvl++GW +F  + +L+++D+vvF++ ++ ++f
  PEQU_08753  46 FRVVLTSSDVERPGILTLPAEQAVQYfppLTSETQHEFLQFYDRWQRLWVFQYCYSGSAGSYVLAGGWDSFLIDMQLEVNDVVVFYRCKEwRNF 139
                 77899***********************9444567778************************************************87765665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.40.330.105.0E-2143134IPR015300DNA-binding pseudobarrel domain
CDDcd100171.12E-1745132No hitNo description
SuperFamilySSF1019364.51E-2045136IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS508639.72846150IPR003340B3 DNA binding domain
SMARTSM010192.7E-746145IPR003340B3 DNA binding domain
PfamPF023629.8E-1646139IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 172 aa     Download sequence    Send to blast
MIRNGSYEPK FIEFVRMFYP EFDDSGSVAL PDASDSFNGV FVKEMFRVVL TSSDVERPGI  60
LTLPAEQAVQ YFPPLTSETQ HEFLQFYDRW QRLWVFQYCY SGSAGSYVLA GGWDSFLIDM  120
QLEVNDVVVF YRCKEWRNFP PLSTDVIDAV RGVTSRCDVQ EDIHVEESTS RV
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020585902.11e-125AP2/ERF and B3 domain-containing transcription factor At1g51120-like
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51120.13e-19RAV family protein