PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PEQU_08754

Organism

Phalaenopsis equestris

Taxonomic ID

78828

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis

Family

Protein Properties

Length: 172aa MW: 19886.6 Da PI: 4.4944

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PEQU_08754	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	47.1	4.4e-15	46	137	1	89
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.se 89 f +lt++dv + g+l+lp ++a +h + ++ ++ l + d+ r We+++ y+ + +++v+++GW +F +L+++D+vv ++ ++ ++ PEQU_08754 46 FRLQLTSADVERPGILTLPEQHAMQHfpPLMSTDPVLLHFFDRMQRLWEFQYWYSASIQSFVFAGGWDSFLVGMELDVNDVVVYYRCKEsRN 137 67799*********************66667999************99999999**********************97765444 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:2.40.330.10	5.5E-16	43	135	IPR015300	DNA-binding pseudobarrel domain
SuperFamily	SSF101936	7.65E-15	45	136	IPR015300	DNA-binding pseudobarrel domain
CDD	cd10017	1.14E-12	45	138	No hit	No description
Pfam	PF02362	2.7E-11	46	137	IPR003340	B3 DNA binding domain
PROSITE profile	PS50863	8.515	46	149	IPR003340	B3 DNA binding domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 172 aa Download sequence Send to blast
MIRDGSYEPK FVEFVRTFYP KFNDSGSIAL PDASDSFNGV IVKEMFRLQL TSADVERPGI 60 LTLPEQHAMQ HFPPLMSTDP VLLHFFDRMQ RLWEFQYWYS ASIQSFVFAG GWDSFLVGME 120 LDVNDVVVYY RCKESRNFPP LSADVIDAVR GVRFRCDVMD IDVEESTSRV SQ

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020585903.1	1e-124	AP2/ERF and B3 domain-containing transcription factor At1g51120-like

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G50680.1	9e-20	RAV family protein