PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_08762
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family B3
Protein Properties Length: 263aa    MW: 30967.5 Da    PI: 7.2741
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_08762genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B350.14.9e-16147239190
                 EEEE-..-HHHHTT-EE--HHH.HTT...---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEE.E-SS.SEE CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeeh...ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFk.ldgr.sef 90 
                 f k+l+  dv  +++++lp + + ++    +++++++ + ++d++++sW++kl++  ++ +y++t+GW++F k+ +L+++D+v+F+ + ++ ++f
  PEQU_08762 147 FRKELLLIDVEIQNLFILPHEAI-SCfesFNSNTGPIWIEFKDRTNQSWKFKLCFVHTPPQYMFTEGWNNFFKEMELCVNDIVLFYqY-KDqQNF 239
                 6788888999999*999**9998.55588556689***************************************************33.332444 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541712.22E-62878IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.106.3E-52971IPR001471AP2/ERF domain
Gene3DG3DSA:2.40.330.108.0E-17145238IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019364.9E-15146237IPR015300DNA-binding pseudobarrel domain
CDDcd100176.34E-12146231No hitNo description
PROSITE profilePS508639.559147253IPR003340B3 DNA binding domain
SMARTSM010190.0018147246IPR003340B3 DNA binding domain
PfamPF023625.5E-13147239IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    Send to blast
MAQQNEVPSH LISSSQAGQQ EFAPPPTWFH GVFPLQNGLW GAQINSIPLG TFMTEIAAAR  60
AYDSACHIHF GNTFFRNLLL TNVTIHEPSF QSLYTSEVIF NMIRDGSYEP NYIHFLCKNC  120
PNFHYCESVV MPTLLDVKKG FLFKEMFRKE LLLIDVEIQN LFILPHEAIS CFESFNSNTG  180
PIWIEFKDRT NQSWKFKLCF VHTPPQYMFT EGWNNFFKEM ELCVNDIVLF YQYKDQQNFP  240
HRFSYMIDVI RGVRSPRMQR RRR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020585802.10.0AP2/ERF and B3 domain-containing transcription factor At1g51120-like
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51120.16e-33RAV family protein