PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_08767
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family B3
Protein Properties Length: 211aa    MW: 25204 Da    PI: 7.9229
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_08767genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B351.71.6e-1695187190
                 EEEE-..-HHHHTT-EE--HHH.HTT...---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEE.E-SS.SEE CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeeh...ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFk.ldgr.sef 90 
                 f k+l+  dv  +++++lp + + ++    +++++++ + ++d++++sW++kl++  ++ +y++t+GW++F k+ +L+++D+v+F+ + ++ ++f
  PEQU_08767  95 FHKELLLIDVEIQNLFILPHQAI-SCfesFNSNTGPIWIEFKDRTNQSWKFKLCFVHTPPQYMFTEGWNNFFKEMELCVNDIVLFYqY-KDqQNF 187
                 778888999999**9****9998.55588556689***************************************************33.332544 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.40.330.102.5E-1792186IPR015300DNA-binding pseudobarrel domain
CDDcd100172.98E-1194179No hitNo description
SuperFamilySSF1019362.75E-1594185IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS508639.37595201IPR003340B3 DNA binding domain
SMARTSM010197.6E-495194IPR003340B3 DNA binding domain
PfamPF023621.2E-1395187IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 211 aa     Download sequence    Send to blast
MSEIAAARAY DSASHMLSGN TFFRNLLLTN VTIHEPSFQS LYSNEVIFNM IRDGSYEPNY  60
IHFLSKNCPN FHYCESVVMP TLLDVKKGFI FKEMFHKELL LIDVEIQNLF ILPHQAISCF  120
ESFNSNTGPI WIEFKDRTNQ SWKFKLCFVH TPPQYMFTEG WNNFFKEMEL CVNDIVLFYQ  180
YKDQQNFPHR FSYMIDVIRG VRSPRMQRRR R
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020585858.11e-159AP2/ERF and B3 domain-containing transcription factor At1g51120-like
RefseqXP_020585859.11e-159AP2/ERF and B3 domain-containing transcription factor At1g51120-like
RefseqXP_020585860.11e-159AP2/ERF and B3 domain-containing transcription factor At1g51120-like
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51120.17e-25RAV family protein