PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_09157
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family C2H2
Protein Properties Length: 188aa    MW: 20589.3 Da    PI: 6.2482
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_09157genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2110.00136486123
                EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                ++C+ C++ F++   L  H  +H
  PEQU_09157 64 FECKTCSRKFTTFQALGGHRASH 86
                89**********99999998887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576672.53E-862130No hitNo description
PfamPF139123.7E-116388IPR007087Zinc finger, C2H2
PROSITE profilePS5015710.1186491IPR007087Zinc finger, C2H2
SMARTSM003550.446486IPR015880Zinc finger, C2H2-like
PROSITE patternPS0002806686IPR007087Zinc finger, C2H2
PfamPF139127.0E-10107132IPR007087Zinc finger, C2H2
PROSITE profilePS501578.912108130IPR007087Zinc finger, C2H2
SMARTSM003550.5108130IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280110130IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 188 aa     Download sequence    Send to blast
MSKRFRLISE EEEEEDNMSS TMSLDSFNIA NVLMLLSKSH RAAAGDTFTA FTVAGGEATE  60
EKVFECKTCS RKFTTFQALG GHRASHKKPR VGGGAATSAA VPEKPRAHEC SICGLEFAIG  120
QALGGHMRRH RAVGQSGGRE MEKGSPEIDL NQPPLERGEE EEEEVRRLPK LLGFTLTPAM  180
VDCYPLIY
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that may be involved in stress responses. {ECO:0000250}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By gibberellin and H(2)O(2). Down-regulated by ascorbate. {ECO:0000269|PubMed:12837949, ECO:0000269|PubMed:16244149}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020577811.11e-137zinc finger protein ZAT12-like
SwissprotQ681X47e-25ZAT5_ARATH; Zinc finger protein ZAT5
TrEMBLA0A2I0XIA42e-88A0A2I0XIA4_9ASPA; Zinc finger protein ZAT5
STRINGGSMUA_Achr10P03700_0011e-38(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP50137157
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28710.11e-28C2H2 family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]