PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_09206
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family WRKY
Protein Properties Length: 223aa    MW: 25386.5 Da    PI: 7.2333
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_09206genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY1054.1e-331874258
                --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS CS
        WRKY  2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnh 58
                dDgy+WrKYGqK++k+s++prsYYrCt ++C++k++vers+edp++++itYeg H h
  PEQU_09206 18 DDGYKWRKYGQKSIKNSPNPRSYYRCTNPKCNAKRQVERSTEDPNMLIITYEGLHLH 74
                8******************************************************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081127.761277IPR003657WRKY domain
SuperFamilySSF1182901.57E-271375IPR003657WRKY domain
Gene3DG3DSA:2.20.25.802.2E-301475IPR003657WRKY domain
SMARTSM007743.8E-381776IPR003657WRKY domain
PfamPF031063.0E-261874IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    Send to blast
MEGKYTLRIK TCGIGVADDG YKWRKYGQKS IKNSPNPRSY YRCTNPKCNA KRQVERSTED  60
PNMLIITYEG LHLHYTYSHL FHSQPHDLSV TKKPKTNSLA WQPHHILNQD QPMQSTVLQL  120
PLITGDSQQN TFLDVQKFQN SAMRDEIMQE EALYDNNNNN KEHCSQGLLE DIVPLMVRKP  180
CSPGESSNEP SCPSQASSPS YSSSLCWTPE TFHFAEGVLS SMV
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A5e-2216741371WRKY transcription factor 1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020577800.11e-168probable WRKY transcription factor 49
TrEMBLA0A2I0VXN41e-113A0A2I0VXN4_9ASPA; Putative WRKY transcription factor 49
STRINGXP_008785604.16e-67(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP75253551
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43290.13e-36WRKY DNA-binding protein 49