PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_09363
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family MYB
Protein Properties Length: 388aa    MW: 42964.9 Da    PI: 7.6286
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_09363genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding41.82.4e-132968141
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqck 41
                     +g WT eEd  l+++vkq+G + W+ Ia+++  gR +kqc+
       PEQU_09363 29 KGQWTVEEDRMLIRLVKQHGIRKWSQIAKKFI-GRIGKQCR 68
                     799*****************************.*******9 PP
2Myb_DNA-binding60.34.1e-19136178145
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 
                      ++rWT+eE++ lv+a+k+ G++ W+ Ia++++ gRt++++k++w+
       PEQU_09363 136 KDRWTEEEEDMLVQAHKEIGNR-WAEIAKRIP-GRTENSIKNHWN 178
                      68********************.*********.***********8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129415.8082479IPR017930Myb domain
SuperFamilySSF466896.42E-132569IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.606.1E-162669IPR009057Homeodomain-like
SMARTSM007172.1E-72877IPR001005SANT/Myb domain
PfamPF002492.7E-112968IPR001005SANT/Myb domain
CDDcd001671.40E-103268No hitNo description
Gene3DG3DSA:1.10.10.601.7E-10119143IPR009057Homeodomain-like
SuperFamilySSF466891.23E-23119189IPR009057Homeodomain-like
PROSITE profilePS5129425.107131185IPR017930Myb domain
SMARTSM007171.5E-17135183IPR001005SANT/Myb domain
PfamPF002494.2E-17136178IPR001005SANT/Myb domain
CDDcd001673.58E-13138181No hitNo description
Gene3DG3DSA:1.10.10.601.8E-18144179IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 388 aa     Download sequence    Send to blast
MECASVNGGK SIEISSSSSV LESSVGIVKG QWTVEEDRML IRLVKQHGIR KWSQIAKKFI  60
GRIGKQCRXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXGK  120
QCRERWHNHL RPGIKKDRWT EEEEDMLVQA HKEIGNRWAE IAKRIPGRTE NSIKNHWNAT  180
KRKQNSKRKL RRKAIHGDAS IPKLTALQQY IKSQTLSLPA HQTKPTTTTI HSSATNEVQM  240
KLPVQPPQPD HGSQLACQMV EELLYMEEEG GDLLGCSDME YVSQFLNAEE ESFPSPVSNV  300
TCAGFEAGSE GGGGGGGGGG GGGSDQLQWD FYLSNLLGGP SLPAIDEFGG SNAGAVAAAD  360
AQASAMKSGD MDLTEIFHWH LSHLKGYN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1mse_C1e-2711918439104C-Myb DNA-Binding Domain
1msf_C1e-2711918439104C-Myb DNA-Binding Domain
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020694116.11e-113transcription factor MYB64-like
TrEMBLA0A2I0WMF03e-98A0A2I0WMF0_9ASPA; Transcription factor MYB98
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP28063788
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18770.11e-38myb domain protein 98