PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_09500
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family bHLH
Protein Properties Length: 92aa    MW: 10395.7 Da    PI: 5.7172
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_09500genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH18.83e-0621631454
                HHHHHHHHHHHCTSCCC.....TTS-STCHHHHHHHHHHHHHH CS
         HLH 14 driNsafeeLrellPkas..kapskKlsKaeiLekAveYIksL 54
                ++i++  ++L++llP+++     s   s + +Le++++YI+sL
  PEQU_09500 21 QQIRELVSKLQTLLPQPVplDSISDAASVSRVLEETCNYIRSL 63
                5899999*********9988888888***************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS508888.962763IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.34E-62181IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.5E-62181IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 92 aa     Download sequence    Send to blast
MSSRRSRSSR HSGSSSRITE QQIRELVSKL QTLLPQPVPL DSISDAASVS RVLEETCNYI  60
RSLHKEVDGL SERLSELLQD TDLEDIIRSL LM
Functional Description ? help Back to Top
Source Description
UniProtAtypical and probable non DNA-binding bHLH transcription factor that integrates multiple signaling pathways to regulate cell elongation and plant development. May have a regulatory role in various aspects of gibberellin-dependent growth and development. {ECO:0000269|PubMed:16527868}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020580834.12e-57transcription factor ILI6-like
SwissprotQ9LJX11e-20PRE5_ARATH; Transcription factor PRE5
TrEMBLA0A2I0VIE53e-29A0A2I0VIE5_9ASPA; Transcription factor bHLH135
STRINGevm.model.supercontig_14.152e-24(Carica papaya)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP3741233
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G74500.14e-20activation-tagged BRI1(brassinosteroid-insensitive 1)-suppressor 1