PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_09565
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family Trihelix
Protein Properties Length: 233aa    MW: 26821.9 Da    PI: 5.0741
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_09565genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix64.62.1e-20587286
    trihelix  2 WtkqevlaLiearremeerlrrgklkkplWeevskkm.rergf...erspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86
                Wt+qe+ +Li+a++e++++l+rg+lk+++Weev++ + ++ gf   +++ +qC++k+e+l+kry+ ++ +  +      s++ +f +++
  PEQU_09565  5 WTDQETAHLIDAYEERWNSLKRGQLKAQQWEEVAAEVaARCGFtvpSKTGTQCRHKIEKLRKRYRSERLRPVR------SSWTFFGRID 87
                ***********************************9966778844456999**************99877776......4688887776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS500907.073165IPR017877Myb-like domain
Gene3DG3DSA:1.10.10.603.7E-5360IPR009057Homeodomain-like
PfamPF138377.4E-21489No hitNo description
SMARTSM005951.4E-51288IPR006578MADF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    Send to blast
PGSPWTDQET AHLIDAYEER WNSLKRGQLK AQQWEEVAAE VAARCGFTVP SKTGTQCRHK  60
IEKLRKRYRS ERLRPVRSSW TFFGRIDRME RGSAPISALP ASSDEDEDSA EPRGSNTRSI  120
NGILREAAPW EDSRGSRSLG KRKRLPADEE EDDDDENDVE DGGDVGEMAA ELRRFGEGYV  180
RMERRRMDVM RELEREWMEM EVKRMEMIME AQRGLMETIA GAFSKKAKNS SDM
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020580937.11e-169trihelix transcription factor ASIL1-like, partial
TrEMBLA0A2I0W9V91e-123A0A2I0W9V9_9ASPA; Uncharacterized protein
STRINGGSMUA_Achr6P04170_0017e-72(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP100782933
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44730.16e-20Trihelix family protein