PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_09690
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family NAC
Protein Properties Length: 313aa    MW: 35314.9 Da    PI: 6.5811
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_09690genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM163.11e-50121401128
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kge 98 
                 lppGfrFhPtd+el+ +yL+kk++++  + +++i+++d+yk++Pw+Lp+k+  +e ew+fFs+rd+ky++g r+nra++ gyWkatg+dk++l++ +++
  PEQU_09690  12 LPPGFRFHPTDQELIIHYLRKKITSSLPPSSSIIADIDLYKFNPWELPEKAFFGEGEWFFFSPRDRKYPNGVRPNRAAACGYWKATGTDKPILASnGSH 110
                 79************************9999999***************87777899*************************************985666 PP

         NAM  99 lvglkktLvfykgrapkgektdWvmheyrl 128
                   g+kk Lvfykgr pkg+ktdWvmheyrl
  PEQU_09690 111 CLGVKKALVFYKGRPPKGTKTDWVMHEYRL 140
                 79**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019419.68E-628168IPR003441NAC domain
PROSITE profilePS5100560.57512168IPR003441NAC domain
PfamPF023653.0E-2713140IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    Send to blast
MEGSGCLNGY QLPPGFRFHP TDQELIIHYL RKKITSSLPP SSSIIADIDL YKFNPWELPE  60
KAFFGEGEWF FFSPRDRKYP NGVRPNRAAA CGYWKATGTD KPILASNGSH CLGVKKALVF  120
YKGRPPKGTK TDWVMHEYRL LDSNTSMHHK HKGTMRLDDW VLCRVRHKGS FLPENDEKPS  180
PSPPPPPAST SIFTKSPVQH DLMQQYAGKE RNNFYELNDC QLMGYLLGSA TQAESGCESS  240
DLVYDGDFFV GDQQQPELVS SMLGSIKRKL SFGALDELMM LPPGKRTHHF NAGEELSPTE  300
SDSDEQECLE FLI
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3swm_A6e-65717015170NAC domain-containing protein 19
3swm_B6e-65717015170NAC domain-containing protein 19
3swm_C6e-65717015170NAC domain-containing protein 19
3swm_D6e-65717015170NAC domain-containing protein 19
3swp_A6e-65717015170NAC domain-containing protein 19
3swp_B6e-65717015170NAC domain-containing protein 19
3swp_C6e-65717015170NAC domain-containing protein 19
3swp_D6e-65717015170NAC domain-containing protein 19
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor of the NAC family. May be associated with anther development and pollen production (Probable). Required for normal seed development and morphology (PubMed:18849494). {ECO:0000269|PubMed:18849494, ECO:0000305|PubMed:21107887}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020575288.10.0NAC transcription factor 32-like
SwissprotQ8GY425e-77NAC25_ARATH; NAC transcription factor 25
TrEMBLA0A2I0WC600.0A0A2I0WC60_9ASPA; NAC transcription factor 25
STRINGXP_008782049.11e-125(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP137971929
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61110.12e-71NAC domain containing protein 25