PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PEQU_09831

Organism

Phalaenopsis equestris

Taxonomic ID

78828

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis

Family

FAR1

Protein Properties

Length: 99aa MW: 11114.8 Da PI: 9.4012

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PEQU_09831	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	25.8	3.6e-08	7	43	54	90
FAR1 54 traetrtgCkaklkvkkekdgkwevtkleleHnHela 90 t+a trtgCk +++ + +g+w +k+ ++HnH++a PEQU_09831 7 TKADTRTGCKVMVRFVVDLKGNWTAAKFIENHNHHFA 43 7899******************************986 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	1.5E-5	6	43	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 99 aa Download sequence Send to blast
MVTVKFTKAD TRTGCKVMVR FVVDLKGNWT AAKFIENHNH HFAESCDKHL LHFSRRISEL 60 NADVLRSMTG SGIGATHTYN FIATKVGGME NLECTKRDA

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020574582.1	1e-46	protein FAR1-RELATED SEQUENCE 5-like

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP1212	5	87

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	4e-08	FAR1-related sequence 5