PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PEQU_09870

Organism

Phalaenopsis equestris

Taxonomic ID

78828

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis

Family

G2-like

Protein Properties

Length: 333aa MW: 38365.4 Da PI: 8.5966

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PEQU_09870	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	98.8	3.7e-31	159	213	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r+rWtp+LHe+F+e+v+ LGG+ekAtPk il+lm+++gLt++h+kSHLQkYRl PEQU_09870 159 KTRIRWTPNLHEKFIECVNCLGGAEKATPKGILKLMDLDGLTIYHIKSHLQKYRL 213 68****************************************************8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51294	10.704	156	216	IPR017930	Myb domain
SuperFamily	SSF46689	4.66E-17	157	213	IPR009057	Homeodomain-like
Gene3D	G3DSA:1.10.10.60	4.1E-28	158	214	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	1.8E-22	159	214	IPR006447	Myb domain, plants
Pfam	PF00249	1.0E-6	163	212	IPR001005	SANT/Myb domain
Pfam	PF14379	5.8E-20	242	287	IPR025756	MYB-CC type transcription factor, LHEQLE-containing domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 333 aa Download sequence Send to blast
MDFPQFEPQV RSPSLFEPPV SSFCSSVSSA SQFSFRPEKK RDVSYSWQTF ESEVKLPLHE 60 YGTSAACDKR QKLFYRHHQD VLAQSVAQST EEGLDSNLNK RQLASLGTAD RSSVKYNLEN 120 FLVRNPNFQI QNVEKHSEAS IVVPVTSFNP NLRSPLPSKT RIRWTPNLHE KFIECVNCLG 180 GAEKATPKGI LKLMDLDGLT IYHIKSHLQK YRLAKYLPES SEGKFQRKAN ELQQFDPKTV 240 IPITEALQIQ LQVQRHLHEQ LEIQRNLQMR IEAQGRQLQK LFKEQMKSNK ILFETQGLDD 300 LFPDKIHEKT PENDQVFGVG EDHQNNHFSS KIS

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
6j4k_A	4e-25	159	216	2	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B	4e-25	159	216	2	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A	4e-25	159	216	2	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C	4e-25	159	216	2	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D	4e-25	159	216	2	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F	4e-25	159	216	2	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H	4e-25	159	216	2	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J	4e-25	159	216	2	59	Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020579319.1	0.0	protein PHOSPHATE STARVATION RESPONSE 1-like
TrEMBL	A0A2I0XFV4	1e-173	A0A2I0XFV4_9ASPA; Protein PHR1-LIKE 1

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP6933	37	51

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06800.1	3e-61	G2-like family protein