PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PEQU_10044

Organism

Phalaenopsis equestris

Taxonomic ID

78828

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis

Family

HD-ZIP

Protein Properties

Length: 303aa MW: 33827.1 Da PI: 6.6254

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PEQU_10044	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	55.4	1e-17	76	129	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k+++++ eq+++Le+ Fe +++ e++ +LA+ lgL+ rq+ +WFqNrRa++k PEQU_10044 76 KKRRLNVEQVRTLEKNFELGNKLEPERKMHLARALGLQPRQIAIWFQNRRARWK 129 4568999**********************************************9 PP
2	HD-ZIP_I/II	128.8	2.2e-41	75	167	1	93
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 ekkrrl+ eqv++LE++Fe +kLeperK++lar+Lglqprq+a+WFqnrRAR+ktkqlEkdy+ Lkr++da+k++n+ L++++++L +e+++ PEQU_10044 75 EKKRRLNVEQVRTLEKNFELGNKLEPERKMHLARALGLQPRQIAIWFQNRRARWKTKQLEKDYDLLKRQFDAIKADNDVLQAHNKKLLAEIQA 167 69**************************************************************************************99986 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50071	16.746	71	131	IPR001356	Homeobox domain
SuperFamily	SSF46689	5.13E-19	72	133	IPR009057	Homeodomain-like
SMART	SM00389	1.7E-17	74	135	IPR001356	Homeobox domain
Pfam	PF00046	5.2E-15	76	129	IPR001356	Homeobox domain
CDD	cd00086	5.11E-16	76	132	No hit	No description
Gene3D	G3DSA:1.10.10.60	1.3E-18	78	138	IPR009057	Homeodomain-like
PRINTS	PR00031	3.5E-5	102	111	IPR000047	Helix-turn-helix motif
PROSITE pattern	PS00027	0	106	129	IPR017970	Homeobox, conserved site
PRINTS	PR00031	3.5E-5	111	127	IPR000047	Helix-turn-helix motif
Pfam	PF02183	3.2E-15	131	171	IPR003106	Leucine zipper, homeobox-associated

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 303 aa Download sequence Send to blast
MKIMHMTSCS GLSSSSPFFP PSFILQMQST NSDHDHLPVP PLNPQDFSSR GMQGIVEACG 60 EGEEELSDDC LQAGEKKRRL NVEQVRTLEK NFELGNKLEP ERKMHLARAL GLQPRQIAIW 120 FQNRRARWKT KQLEKDYDLL KRQFDAIKAD NDVLQAHNKK LLAEIQALKG RDAPELINLN 180 KETEGSCSNR SENSSEINLD ISRTSTTAAM AASASASAAT ATAATVVSEN PHVNHPIQSI 240 PFFSVIRPPV IAHLLPTSSR PDHLHCTKIE HGALVSDENF GNLLCGMDDQ NAYWPWPDHH 300 NLH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	123	131	RRARWKTKQ

Functional Description ? help Back to Top
Source	Description
UniProt	Probable transcription factor. {ECO:0000250}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020586665.1	0.0	homeobox-leucine zipper protein HOX21-like
Swissprot	Q8S7W9	2e-93	HOX21_ORYSJ; Homeobox-leucine zipper protein HOX21
TrEMBL	A0A2I0XED2	1e-170	A0A2I0XED2_9ASPA; Homeobox-leucine zipper protein HOX21
STRING	XP_008797128.1	1e-116	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2289	38	94

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69780.1	4e-78	HD-ZIP family protein