PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_10362
Common NameMYB11
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family MYB
Protein Properties Length: 238aa    MW: 27283.1 Da    PI: 8.5883
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_10362genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding52.21.4e-161461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEdell+  v+  G g+W++ +++ g++R +k+c++rw++yl
       PEQU_10362 14 KGAWTAEEDELLASFVNAVGEGNWTSLPKKAGLNRRGKSCRLRWLNYL 61
                     79********************************************97 PP
2Myb_DNA-binding53.36.5e-1767111147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      rg+ + eE+el+++++k+lG++ W++Ia +++ gRt++++k++w++ 
       PEQU_10362  67 RGNISVEEEELIIRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNTT 111
                      78999*****************.*********.************87 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129414.574961IPR017930Myb domain
SuperFamilySSF466892.82E-2912108IPR009057Homeodomain-like
SMARTSM007173.6E-131363IPR001005SANT/Myb domain
PfamPF002492.0E-151461IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.604.4E-221568IPR009057Homeodomain-like
CDDcd001671.20E-81661No hitNo description
PROSITE profilePS5129426.64962116IPR017930Myb domain
SMARTSM007171.9E-1666114IPR001005SANT/Myb domain
PfamPF002497.4E-1567111IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.606.3E-2569116IPR009057Homeodomain-like
CDDcd001672.92E-1171112No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 238 aa     Download sequence    Send to blast
MKRRAKYNED GVNKGAWTAE EDELLASFVN AVGEGNWTSL PKKAGLNRRG KSCRLRWLNY  60
LRPNIKRGNI SVEEEELIIR LHKLLGNRWS LIAGRLPGRT DNEIKNYWNT TLSKKIQTKK  120
FTINMPNVKA WKPKSNPLET KITSSISNLI QTTEIKCTKA SYPLHVLPST SEVIQTQQIS  180
QQNFQEELIE EKKGKVLDCD SFSYDDEMWI AGLEFGGEIN VIDDYDNDLV CSLFDKNL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1a5j_A2e-27141187110B-MYB
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKF7694760.0KF769476.1 Phalaenopsis equestris MYB transcription factor 11 (MYB11) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020573611.11e-176transcription factor MYB114-like
TrEMBLA0A096ZX391e-172A0A096ZX39_PHAEQ; MYB transcription factor 11
STRINGERN112223e-62(Amborella trichopoda)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP11637448
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13540.12e-53myb domain protein 5