PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_10450
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family ZF-HD
Protein Properties Length: 233aa    MW: 26133.1 Da    PI: 9.7991
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_10450genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer88.85.5e-282069357
  ZF-HD_dimer  3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrev 57
                  ++Y+eCl+NhAa++Gg+a+DGCgEfm+      + ++lkCaACgCHRnFHRre 
   PEQU_10450 20 DCKYRECLRNHAAAMGGQAYDGCGEFMAG-----EDESLKCAACGCHRNFHRREG 69
                 589*************************7.....4579***************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF047704.4E-232168IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
ProDomPD1257747.0E-162267IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
TIGRFAMsTIGR015662.6E-252268IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
PROSITE profilePS5152325.9252368IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
Gene3DG3DSA:1.10.10.604.4E-28120189IPR009057Homeodomain-like
SuperFamilySSF466898.55E-17121188IPR009057Homeodomain-like
TIGRFAMsTIGR015656.0E-26130187IPR006455Homeodomain, ZF-HD class
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    Send to blast
MDLSLVPYVD LPAAEKTSGD CKYRECLRNH AAAMGGQAYD GCGEFMAGED ESLKCAACGC  60
HRNFHRREGS PTRPPILKPI LKHAMVPAPS PVAFFPPPPL PFHQIPPPVS PDLGRGASET  120
PPRREEGPMR KRYRTKFSAE QKEKMWIFAE KLGWRIQKHD GEKLEEFCVE IGVKRHALKV  180
WMHNHKNNLS SSAITTSAAG LRGPPPPPPA PAPRRYSYHP SLIGFRWHLQ SRF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wh7_A2e-241311881875ZF-HD homeobox family protein
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020573651.11e-173zinc-finger homeodomain protein 8-like
TrEMBLA0A2I0X2491e-108A0A2I0X249_9ASPA; ZF-HD homeobox protein
STRINGXP_008807662.16e-59(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP136492225
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24660.11e-44homeobox protein 22