PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_10556
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family FAR1
Protein Properties Length: 192aa    MW: 21647.2 Da    PI: 5.8869
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_10556genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR1401.3e-1211762290
        FAR1 22 skrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90
                 +++++ + +++ C k  +++e++ +    + ++a trtgCk +++ + + +g+w v+k+ ++HnH+l+
  PEQU_10556 11 WSNSKKLKVKDYICGKTVYKKESNIT---VKFRKADTRTGCKVMIQFHIDFEGNWTVAKFIENHNHPLT 76
                357788999********999998877...788999********************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031013.9E-101276IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 192 aa     Download sequence    Send to blast
MKDHTDHTTY WSNSKKLKVK DYICGKTVYK KESNITVKFR KADTRTGCKV MIQFHIDFEG  60
NWTVAKFIEN HNHPLTESGD KHLLRSSRRI SELNADVLRS MIGSGIRATH AYNFIATEVG  120
GMEQEAASNR QAVDAFKQSL TDCLTQATDD ALDPADDEFF PRLQDEILQK PADGALEAVD  180
GEIDGYFYSS FG
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020574582.12e-68protein FAR1-RELATED SEQUENCE 5-like
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP1212587
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.11e-10FAR1-related sequence 5