PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_10623
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family FAR1
Protein Properties Length: 100aa    MW: 11661.3 Da    PI: 9.6113
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_10623genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR122.53.8e-073405390
        FAR1 53 rtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90
                 +ra trtg  a+++   + +g+w v+k+ + HnH+la
  PEQU_10623  3 FKRADTRTGYPAMIRYFVDLEGNWSVKKFIESHNHPLA 40
                57999*******************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031014.5E-5340IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 100 aa     Download sequence    Send to blast
MRFKRADTRT GYPAMIRYFV DLEGNWSVKK FIESHNHPLA EDGDKHLLRS SRKMCDVSVD  60
ILRSMTKSRI RTNDAFKFLA TEVGGVENID CTKRDVYNFI
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020573853.11e-59protein FAR1-RELATED SEQUENCE 5-like
RefseqXP_020581377.11e-59protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A2I0VPA52e-33A0A2I0VPA5_9ASPA; Protein FAR1-RELATED SEQUENCE 5
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP1212587
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.13e-08FAR1-related sequence 5