PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_10677
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family G2-like
Protein Properties Length: 375aa    MW: 42047.1 Da    PI: 7.125
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_10677genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like103.61.2e-321973155
     G2-like  1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                kprl+WtpeLH+rFveav+qLGG+ekAtPkt+++lm+++g+tl+h+kSHLQkYRl
  PEQU_10677 19 KPRLKWTPELHSRFVEAVKQLGGAEKATPKTVMRLMGIPGVTLYHLKSHLQKYRL 73
                79****************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129410.3211676IPR017930Myb domain
Gene3DG3DSA:1.10.10.609.7E-311774IPR009057Homeodomain-like
SuperFamilySSF466892.51E-161874IPR009057Homeodomain-like
TIGRFAMsTIGR015572.3E-221974IPR006447Myb domain, plants
PfamPF002493.5E-82172IPR001005SANT/Myb domain
PfamPF143795.2E-16115159IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 375 aa     Download sequence    Send to blast
MQAARGSGEP GLVLSTDAKP RLKWTPELHS RFVEAVKQLG GAEKATPKTV MRLMGIPGVT  60
LYHLKSHLQK YRLSKNILAQ SNVKIPTAAL DKTSLEGNGS LVNNINFGPH KYKTMQISEA  120
LQIQMEQRIH EQLEVQKHLQ RRMEVQGKYL QSVLEKAQEA FGKQNSGSAG LEASRTQLSE  180
LISKVSNECF TSTFPYLEKT YCSHNQEGHM AQINNFSMYS CLTSCQESQN GQEMHDTNMV  240
LTAYYHGNLS LGTQEMEQIQ SGWSEDLNGS KIFSQTGVKD STQNTLPVSR GFGILSICKS  300
EGNRNLEIHP RQNEEHNSYL DRADYERYVI QQRSLKNPSE CEQPSATTQL DLNACDEYNV  360
SKNGNGNDLN GFSWS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A8e-201875158Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B8e-201875158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A8e-201875158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C8e-201875158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D8e-201875158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F8e-201875158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H8e-201875158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J8e-201875158Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020582975.11e-173myb-related protein 2-like
TrEMBLA0A2I0VSS51e-145A0A2I0VSS5_9ASPA; Myb family transcription factor APL
STRINGXP_008793331.11e-116(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP35743879
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18240.46e-89myb-related protein 1