PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PEQU_10733

Organism

Phalaenopsis equestris

Taxonomic ID

78828

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis

Family

WOX

Protein Properties

Length: 159aa MW: 18776.4 Da PI: 9.0636

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PEQU_10733	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	67.4	1.9e-21	6	66	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++R+++t+eql +Lee++++ r+p+a+++++++++l +++ ++V++WFqN++a+e++ PEQU_10733 6 STRWCPTPEQLMILEEMYRSgVRTPNASQIQQITTHLsyygKIEGKNVFYWFQNHKARERQ 66 58***************99************************************97 PP
2	Wus_type_Homeobox	123.8	6.7e-40	6	67	3	64
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 +tRW+PtpeQ++iLee+y+sG+rtPn+++iq+it++L+ yGkie+kNVfyWFQN+kaRerqk PEQU_10733 6 STRWCPTPEQLMILEEMYRSGVRTPNASQIQQITTHLSYYGKIEGKNVFYWFQNHKARERQK 67 79***********************************************************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50071	10.171	2	67	IPR001356	Homeobox domain
SMART	SM00389	8.1E-5	4	71	IPR001356	Homeobox domain
CDD	cd00086	1.30E-4	5	67	No hit	No description
Pfam	PF00046	4.7E-19	6	66	IPR001356	Homeobox domain
SuperFamily	SSF46689	4.28E-12	7	67	IPR009057	Homeodomain-like
Gene3D	G3DSA:1.10.10.60	4.2E-8	8	66	IPR009057	Homeodomain-like

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 159 aa Download sequence Send to blast
MPQVPSTRWC PTPEQLMILE EMYRSGVRTP NASQIQQITT HLSYYGKIEG KNVFYWFQNH 60 KARERQKLRR RLTKQQQQQQ HPIQFQNLED ASLPLHDDSS QMLYGQQMNP QFFQQVALSP 120 VSSCAFSFYL IELASLHVRR YEVHATKLGF LLFEEVLSL

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020583099.1	1e-81	WUSCHEL-related homeobox 3B
TrEMBL	A0A2I0WTC3	4e-63	A0A2I0WTC3_9ASPA; WUSCHEL-related homeobox 3
STRING	XP_008776170.1	6e-47	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2177	38	97

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28610.1	2e-34	WOX family protein