PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_10907
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family C2H2
Protein Properties Length: 340aa    MW: 37866.2 Da    PI: 11.6853
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_10907genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H217.41.2e-05180202223
                 EETTTTEEESSHHHHHHHHHH.T CS
     zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                  Cp Cg++F+  ++L+ H+   H
  PEQU_10907 180 ACPQCGEVFNKTDSLELHQAIrH 202
                 6******************9877 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE patternPS000280179202IPR007087Zinc finger, C2H2
PROSITE profilePS501579.265179207IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 340 aa     Download sequence    Send to blast
MALTSFLSSA DAGGQDHHHH RKPKKKHPPP PSPLTLSWDH LRTLLNCKTN TGSTQVHDPA  60
SSSAAAAPPS FSTGKHLKLR LPFVPSICAL GDVVHGSIRV VHRSDIDQSN SSGGESGPLS  120
RSSAAGELDS PGGPRRQPPA ASAAAKGGSQ LMRLSGCYEC RAVDAEPVSR RYPRPRTLCA  180
CPQCGEVFNK TDSLELHQAI RHAVSELGPE DSGRHIVEII FKSSWQKNHR TICKIDRILK  240
VHNTPRTISR FEDYRAAHVP PPPRRSQPPE SPLRRRRQRA SPILLRLHLL PPRSRRLHLT  300
LLRRWWRRRL LRRLRRHSAW IPAAVPPIWS PNDGEQRPGS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1306313RRRLLRRL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020581701.10.0LOW QUALITY PROTEIN: uncharacterized protein LOC110025512
TrEMBLA0A2I0VCI61e-110A0A2I0VCI6_9ASPA; Uncharacterized protein
STRINGXP_008807585.19e-71(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP124312731
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75710.12e-48C2H2-like zinc finger protein