PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_11498
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family C2H2
Protein Properties Length: 203aa    MW: 22090.5 Da    PI: 8.6841
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_11498genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.60.0008487109123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 y C++C+ksF +   L  H  +H
  PEQU_11498  87 YGCNICNKSFDSYQALGGHRTSH 109
                 67********9999998888777 PP
2zf-C2H211.20.0011139161123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 ++C++C k F++   L  H r+H
  PEQU_11498 139 HVCNICAKNFPSGQALGGHKRSH 161
                 79******************999 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576673.1E-785161No hitNo description
PROSITE profilePS5015710.53387114IPR007087Zinc finger, C2H2
PfamPF139123.2E-1187111IPR007087Zinc finger, C2H2
SMARTSM003550.1787109IPR015880Zinc finger, C2H2-like
PROSITE patternPS00028089109IPR007087Zinc finger, C2H2
PfamPF139125.8E-11139162IPR007087Zinc finger, C2H2
SMARTSM003550.59139161IPR015880Zinc finger, C2H2-like
PROSITE profilePS501579.64139162IPR007087Zinc finger, C2H2
PROSITE patternPS000280141161IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    Send to blast
MLAREHANLI YDSNDKFSLT IGSGNKVHSF PCEDGDQQSK KLKVSFFASS SDYGDINPAV  60
LKNEKRSLSI QCDSESGKQS SCNRKRYGCN ICNKSFDSYQ ALGGHRTSHS KVRGEFKKLI  120
NQNHDSQTVK KLPKNFGNHV CNICAKNFPS GQALGGHKRS HSIAAAAVVV SSADNTAAHP  180
HPTPMEVEPN SIDLNLPATD NDS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020591170.11e-148zinc finger protein ZAT9-like
TrEMBLA0A2I0W8T02e-54A0A2I0W8T0_9ASPA; Zinc finger protein ZAT9
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP3753623
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G53600.12e-17C2H2 family protein