PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PEQU_12360

Organism

Phalaenopsis equestris

Taxonomic ID

78828

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis

Family

bHLH

Protein Properties

Length: 230aa MW: 25504.4 Da PI: 9.8915

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PEQU_12360	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	20.1	1.1e-06	102	141	10	54
HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 r +R+++ +a+ L+ lP + + + a+iL +++YIk L PEQU_12360 102 RIYRAKVAEAIKALKNALPFS-----EMGNQASILDNVIDYIKFL 141 89****************8.....679************99 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
CDD	cd00083	3.33E-6	91	145	No hit	No description
PROSITE profile	PS50888	11.147	92	141	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	2.1E-8	93	152	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamily	SSF47459	3.79E-8	93	152	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SMART	SM00353	0.0012	98	147	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 230 aa Download sequence Send to blast
MLEPVIRLQR AVRKADGGSL ANKQIILSFC SLRCSIETQR INPRREGLRQ PFVIGYSLPN 60 TQGEQAKISN KPPSKYCSNV AQQSEASMGT KMTRAPKVLS SRIYRAKVAE AIKALKNALP 120 FSEMGNQASI LDNVIDYIKF LKLRLNVLSQ TRLTGEASAH SFVHIEGFGH YLLHPQTYHQ 180 PLEEMVGNLL KSNPQVANEL LEHKGLAIVP MDSAYTALQN SLNPCSNSCQ

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020580673.1	1e-126	transcription factor bHLH66-like isoform X2
TrEMBL	A0A2I0WFP7	2e-82	A0A2I0WFP7_9ASPA; Transcription factor bHLH82
STRING	XP_008810758.1	1e-39	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP25051	3	4

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G30980.1	3e-16	LJRHL1-like 2