PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_12386
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family G2-like
Protein Properties Length: 62aa    MW: 7272.41 Da    PI: 9.88
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_12386genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like46.39.6e-1518492556
     G2-like 25 ekAtPktilelmkvkgLtlehvkSHLQkYRla 56
                ++A+Pkti +lm+v+gLt+e+v S LQkYRl+
  PEQU_12386 18 KNAVPKTIIQLMNVDGLTRENVVSQLQKYRLY 49
                79****************************85 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466891.02E-71652IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.602.3E-141653IPR009057Homeodomain-like
TIGRFAMsTIGR015574.0E-101848IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 62 aa     Download sequence    Send to blast
MQGLFDETTE ISARTQYKNA VPKTIIQLMN VDGLTRENVV SQLQKYRLYV KRYKDSVNHL  60
LI
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that is essential for the generation of the circadian clock oscillation. Binds to specific sites on CCA1 promoter leading to CCA1 activation (By similarity). {ECO:0000250}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Circadian oscillation with peaks at subjective dusk. {ECO:0000269|PubMed:16164597}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_023732561.18e-15transcription factor PCL1-like
RefseqXP_023732562.18e-15transcription factor PCL1-like
SwissprotQ94DH37e-16PCL1_ORYSJ; Transcription factor PCL1
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP162034105
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G46640.21e-16G2-like family protein