PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_12493
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family Dof
Protein Properties Length: 102aa    MW: 11516 Da    PI: 11.5929
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_12493genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof122.51.4e-383796261
      zf-Dof  2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61
                +e+al+cprC+s+ntkfCy+nnysl+qPr+fCk+CrryWt+GG+lrnvPvGggrr++ ks
  PEQU_12493 37 PEAALSCPRCHSNNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGTLRNVPVGGGRRRRSKS 96
                67899************************************************9987665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074785.0E-292186IPR003851Zinc finger, Dof-type
PfamPF027011.2E-324095IPR003851Zinc finger, Dof-type
PROSITE profilePS5088428.5844195IPR003851Zinc finger, Dof-type
PROSITE patternPS0136104379IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009640Biological Processphotomorphogenesis
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 102 aa     Download sequence    Send to blast
TTSDDQQPLP PAGSTGSGPI RPVSMTERAR LAKIPQPEAA LSCPRCHSNN TKFCYFNNYS  60
LTQPRHFCKT CRRYWTRGGT LRNVPVGGGR RRRSKSRESR HL
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that binds specifically to a 5'-AA[AG]G-3' consensus core sequence. Enhances the DNA binding of OBF transcription factors to OCS elements. {ECO:0000269|PubMed:12887587}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00407DAPTransfer from AT3G55370Download
Motif logo
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By auxin and salicylic acid (SA). Repressed by jasmonic acid (JA). {ECO:0000269|PubMed:10758484, ECO:0000269|PubMed:12887587}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020703512.13e-50dof zinc finger protein DOF2.2
SwissprotQ9M2U15e-42DOF36_ARATH; Dof zinc finger protein DOF3.6
TrEMBLA0A2I0WZ506e-49A0A2I0WZ50_9ASPA; Dof zinc finger protein DOF3.6
STRINGXP_006486095.13e-44(Citrus sinensis)
STRINGXP_006436002.13e-44(Citrus clementina)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP14037367
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G55370.22e-39OBF-binding protein 3