PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_12575
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family C2H2
Protein Properties Length: 148aa    MW: 15900.7 Da    PI: 8.632
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_12575genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.10.000286385123
                EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                y+C++C + F ++  L  H++ H
  PEQU_12575 63 YECQYCFRGFANSQALGGHQNAH 85
                99******************988 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576678.3E-66091No hitNo description
PROSITE profilePS5015711.5726390IPR007087Zinc finger, C2H2
PROSITE patternPS0002806585IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009736Biological Processcytokinin-activated signaling pathway
GO:0009740Biological Processgibberellic acid mediated signaling pathway
GO:0010090Biological Processtrichome morphogenesis
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 148 aa     Download sequence    Send to blast
APKLKLFGYP MPENSDSALD QTAILLPDHT PGSSSSSSSS TTTTSGAAAA TAATEPRKYE  60
CQYECQYCFR GFANSQALGG HQNAHKKERQ HLKRSQSSPA LYPRGANPMV SAFSPPPHLL  120
PDSSHWVYFS RAAQPLHVSH GCVFPSPA
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020702456.12e-62zinc finger protein GIS3-like
TrEMBLA0A2I0WH481e-60A0A2I0WH48_9ASPA; Zinc finger protein 6
STRINGXP_008797852.17e-39(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP795124
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41940.16e-13zinc finger protein 8