PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_12753
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family C2H2
Protein Properties Length: 185aa    MW: 20355 Da    PI: 8.2841
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_12753genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.45.2e-05105127123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 y C++Cgk F +   L  H r+H
  PEQU_12753 105 YGCSICGKNFASGQALSGHKRLH 127
                 67*******************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF139121.5E-65578IPR007087Zinc finger, C2H2
SuperFamilySSF576679.96E-7101128No hitNo description
Gene3DG3DSA:3.30.160.601.2E-5101127IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
PROSITE profilePS5015711.468105127IPR007087Zinc finger, C2H2
PfamPF139126.5E-8105127IPR007087Zinc finger, C2H2
PROSITE patternPS000280107127IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 185 aa     Download sequence    Send to blast
MIPSVPKFDF GINEHEKIQS FPSESEIFLK LKKSKPSSHR KDLHYIASGI EKKSRYNCKT  60
CGRTFPTCQA LGGRRASYMR IKFCCFSEVL ATKKLNIQNH GSKFYGCSIC GKNFASGQAL  120
SGHKRLHLVA ADNAASASAE SVQASAAVNA NMEQMSSFFG TLDLNLSAME DESNGDYDDM  180
TEDSI
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020572968.11e-124zinc finger protein ZAT9-like
TrEMBLA0A2I0WTX22e-44A0A2I0WTX2_9ASPA; Zinc finger protein ZAT1
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP38613573
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28200.12e-16C2H2 family protein