PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_12845
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family WRKY
Protein Properties Length: 187aa    MW: 20569.1 Da    PI: 7.9591
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_12845genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY86.62.3e-272787259
                --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY  2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59
                dDgy+WrKYGqK++ g++fprsY+rCt++   gC++k+kv++ + dp++ ei+Y geH+++
  PEQU_12845 27 DDGYTWRKYGQKVILGARFPRSYFRCTHKnfyGCKAKRKVQKLDADPNIYEIIYCGEHTCQ 87
                8***************************99999**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.9E-261987IPR003657WRKY domain
SuperFamilySSF1182901.31E-242588IPR003657WRKY domain
SMARTSM007741.7E-362688IPR003657WRKY domain
PROSITE profilePS5081120.0712789IPR003657WRKY domain
PfamPF031064.7E-252787IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 187 aa     Download sequence    Send to blast
MIRKDSEETR TVTIPAVRTG NLELPPDDGY TWRKYGQKVI LGARFPRSYF RCTHKNFYGC  60
KAKRKVQKLD ADPNIYEIIY CGEHTCQTSP TPLILPSITP TSNETTLANM PVMIGASSSP  120
SVGSWFLSSH EVGESSRAHV GPQVQQQPIR TGREGEGSVA DLADAMFNSG SSSNNSMDTI  180
FTFKTDG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B2e-20584274Disease resistance protein RRS1
5w3x_D2e-20584274Disease resistance protein RRS1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00304DAPTransfer from AT2G40740Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020572709.11e-138WRKY transcription factor 55-like
TrEMBLA0A2I0X5Q63e-99A0A2I0X5Q6_9ASPA; WRKY transcription factor 55
STRINGXP_008778512.15e-56(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP97963344
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40740.15e-36WRKY DNA-binding protein 55