PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_12968
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family WRKY
Protein Properties Length: 500aa    MW: 54842.1 Da    PI: 7.4808
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_12968genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY99.32.4e-31222278259
                 --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                 dDgynWrKYGqK+vkg e+prsYY+Ct+ +Cpvkkkvers  d++v+ei+Y g+Hnh+
  PEQU_12968 222 DDGYNWRKYGQKQVKGCEYPRSYYKCTQVKCPVKKKVERSV-DGQVTEIIYMGQHNHD 278
                 8****************************************.***************7 PP
2WRKY103.41.3e-32392450159
                 ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                 ldDgy+WrKYGqK+vkg+++prsYY+Cts gC+v+k+ver+++d k+v++tYeg+Hnh+
  PEQU_12968 392 LDDGYRWRKYGQKKVKGNPNPRSYYKCTSVGCKVRKHVERASTDRKAVITTYEGKHNHD 450
                 59********************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.9E-28214280IPR003657WRKY domain
PROSITE profilePS5081123.755216280IPR003657WRKY domain
SuperFamilySSF1182901.83E-25217280IPR003657WRKY domain
SMARTSM007749.1E-34221279IPR003657WRKY domain
PfamPF031067.6E-24222278IPR003657WRKY domain
Gene3DG3DSA:2.20.25.805.5E-36377452IPR003657WRKY domain
SuperFamilySSF1182902.35E-28384452IPR003657WRKY domain
PROSITE profilePS5081137.987387452IPR003657WRKY domain
SMARTSM007745.0E-37392451IPR003657WRKY domain
PfamPF031063.1E-25393450IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 500 aa     Download sequence    Send to blast
RPSISLPAKS VVESLFRGGP AEASPGPMTL ASSLFEAEPE YRSFSQLLAG AMASPAQPPE  60
EAAAAIDARG KEGASLNLGH SRPMNFSVVQ SQLFMVPPGF SPGGLLDSPA LFSSWCVVFS  120
MIDVLHCVLG VTFGFSKLTP WANGYMQVNL GNSHQHALAE FSSSLPSSSL TQPVSTINMA  180
ASSQPMLPIT HGANILYPES AFSSDFDQIS QPATIVADKP ADDGYNWRKY GQKQVKGCEY  240
PRSYYKCTQV KCPVKKKVER SVDGQVTEII YMGQHNHDRP IPSRRSKEGG AELNGNPDTN  300
NSELLRKDDH LNETSNGMIG LLSTKEQQSG HGLSEHLEGS SDDEELCDGE AEDGEPEHKR  360
RNLETRMIES SSHRTVTEPR IILQTTSEVD LLDDGYRWRK YGQKKVKGNP NPRSYYKCTS  420
VGCKVRKHVE RASTDRKAVI TTYEGKHNHD VPAARNSSHY TSNTANRSSS SSHDNHNSHG  480
RSDSRNNVRR PVALLRVKGE
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A2e-37222453878Probable WRKY transcription factor 4
2lex_A2e-37222453878Probable WRKY transcription factor 4
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020590052.10.0probable WRKY transcription factor 4 isoform X1
TrEMBLA0A2I0VR740.0A0A2I0VR74_9ASPA; Putative WRKY transcription factor 3
STRINGXP_009619961.11e-148(Nicotiana tomentosiformis)
STRINGXP_010258724.11e-148(Nelumbo nucifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP134538122
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G03340.11e-118WRKY DNA-binding protein 3