PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PEQU_13171

Organism

Phalaenopsis equestris

Taxonomic ID

78828

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis

Family

FAR1

Protein Properties

Length: 122aa MW: 14314.1 Da PI: 8.4922

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PEQU_13171	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	26	3e-08	60	121	3	65
FAR1 3 YneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkak 65 Y+ YA+++ F+v+k++s +++++i++++fv k +++e k++ + r ++a trtgC a PEQU_13171 60 YCVYAHHIRFTVQKDHSGFPSNSKKIKTKDFVYGKTSFKKELKDN-ITVRFKKADTRTGCPAI 121 99*************************************9999.99999*******996 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	3.1E-5	60	121	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 122 aa Download sequence Send to blast
MLESHDTCER HDNELESQNI FENRDKELSL VATKEIRQSP EAEKLFRAVF HNEKEAHEQY 60 CVYAHHIRFT VQKDHSGFPS NSKKIKTKDF VYGKTSFKKE LKDNITVRFK KADTRTGCPA 120 II

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020581377.1	5e-51	protein FAR1-RELATED SEQUENCE 5-like
TrEMBL	A0A2I0VV98	6e-17	A0A2I0VV98_9ASPA; Protein FAR1-RELATED SEQUENCE 5

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP1212	5	87