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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| TF ID | PEQU_13318 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
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| Family | bZIP | ||||||||
| Protein Properties | Length: 113aa MW: 12928.8 Da PI: 11.1728 | ||||||||
| Description | bZIP family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | bZIP_1 | 34 | 6.2e-11 | 5 | 42 | 9 | 46 |
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 9 rkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46
r NR +A+rsR RK+++i eLe+ v +L++e +aL
PEQU_13318 5 RILANRQSAQRSRVRKLQYISELERSVTTLQTEVSALS 42
6677*****************************98886 PP
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| Protein Features ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Database | Entry ID | E-value | Start | End | InterPro ID | Description |
| SMART | SM00338 | 1.1E-6 | 1 | 61 | IPR004827 | Basic-leucine zipper domain |
| SuperFamily | SSF57959 | 6.47E-11 | 3 | 55 | No hit | No description |
| CDD | cd14703 | 3.46E-16 | 5 | 52 | No hit | No description |
| Gene3D | G3DSA:1.20.5.170 | 5.1E-13 | 5 | 54 | No hit | No description |
| Pfam | PF00170 | 4.9E-9 | 5 | 44 | IPR004827 | Basic-leucine zipper domain |
| PROSITE pattern | PS00036 | 0 | 5 | 19 | IPR004827 | Basic-leucine zipper domain |
| Gene Ontology ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| GO Term | GO Category | GO Description | ||||
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
| GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
| Sequence ? help Back to Top |
|---|
| Protein Sequence Length: 113 aa Download sequence Send to blast |
MKLLRILANR QSAQRSRVRK LQYISELERS VTTLQTEVSA LSPRVAFFDH QRSILTVGNS 60 QLKQRIAALA QDKIFKDAHQ EALKKEIERL RLVYQRQKAA SAPENGSNTE PLT |
| Functional Description ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Source | Description | |||||
| UniProt | Transcription regulator. {ECO:0000250}. | |||||
| Regulation -- Description ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Source | Description | |||||
| UniProt | INDUCTION: By white light. {ECO:0000269|PubMed:18065552}. | |||||
| Regulation -- PlantRegMap ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Source | Upstream Regulator | Target Gene | ||||
| PlantRegMap | Retrieve | - | ||||
| Annotation -- Protein ? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-value | Description | ||||
| Refseq | XP_020576840.1 | 2e-71 | basic leucine zipper 19-like isoform X1 | ||||
| Swissprot | Q6K3R9 | 4e-54 | BZP19_ORYSJ; Basic leucine zipper 19 | ||||
| TrEMBL | A0A2I0WAJ1 | 6e-57 | A0A2I0WAJ1_9ASPA; Putative transcription factor PosF21 | ||||
| STRING | XP_008790058.1 | 2e-53 | (Phoenix dactylifera) | ||||
| STRING | Sb04g008840.1 | 1e-53 | (Sorghum bicolor) | ||||
| STRING | GSMUA_Achr6P26930_001 | 2e-53 | (Musa acuminata) | ||||
| Orthologous Group ? help Back to Top | |||
|---|---|---|---|
| Lineage | Orthologous Group ID | Taxa Number | Gene Number |
| Monocots | OGMP1322 | 38 | 125 |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT3G58120.1 | 2e-51 | bZIP family protein | ||||




