PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_13628
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family bHLH
Protein Properties Length: 102aa    MW: 11601.5 Da    PI: 10.3154
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_13628genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.11.1e-1125651055
                HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH 10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                r+RR+riN+++  L+ l+P+      +K++ +++Le+Av+Y+k Lq
  PEQU_13628 25 RKRRERINERLKILQNLVPNG-----TKVDISTMLEEAVQYVKFLQ 65
                9******************97.....8******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.96E-151481IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.3261564IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.109.3E-142075IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003538.6E-122170IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.80E-112469No hitNo description
PfamPF000104.6E-92565IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 102 aa     Download sequence    Send to blast
MSRNTNETIR AGRGSATDPQ SLYARKRRER INERLKILQN LVPNGTKVDI STMLEEAVQY  60
VKFLQVQIKL LSSNELWMYA PIAYNGMNIG IDLMMSPSLK IG
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020579111.17e-68transcription factor bHLH84-like
SwissprotQ7XHI93e-51BH084_ARATH; Transcription factor bHLH84
TrEMBLA0A2I0VEV61e-53A0A2I0VEV6_9ASPA; Transcription factor bHLH84
TrEMBLA0A444EY901e-54A0A444EY90_ENSVE; Uncharacterized protein
STRINGGSMUA_Achr2P17130_0018e-54(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP43103270
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G14760.11e-53bHLH family protein