PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_13631
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family C2H2
Protein Properties Length: 171aa    MW: 18219.6 Da    PI: 8.6243
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_13631genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.20.0005588110123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 ++C +C k+F +   L  H r+H
  PEQU_13631  88 HQCLICWKTFATGQALGGHKRRH 110
                 79*******************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003550.0353961IPR015880Zinc finger, C2H2-like
PROSITE profilePS501579.5153961IPR007087Zinc finger, C2H2
PfamPF139122.8E-113963IPR007087Zinc finger, C2H2
SuperFamilySSF576671.78E-839110No hitNo description
PROSITE patternPS0002804161IPR007087Zinc finger, C2H2
SMARTSM003550.3988110IPR015880Zinc finger, C2H2-like
PfamPF139124.0E-888110IPR007087Zinc finger, C2H2
PROSITE profilePS501578.76788110IPR007087Zinc finger, C2H2
PROSITE patternPS00028090110IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 171 aa     Download sequence    Send to blast
MEGFRGSQSE EEYLALCLLS LARHASPAFS HTPPPTLDHK CSLCAKAFAS YQALGGHMTS  60
HRKPIGDNRL FSGSQPAASS SSDGAKGHQC LICWKTFATG QALGGHKRRH FDGTIGSAVG  120
KGSAATSGVF RGFDLNLPPV MELGRQCWGL EDEEAVQSPN PVKRPRLSII A
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020579179.11e-122zinc finger protein AZF3-like
TrEMBLA0A2I0X1P62e-61A0A2I0X1P6_9ASPA; Zinc finger protein ZAT10
STRINGXP_008792675.13e-37(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP102236113
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27730.18e-36salt tolerance zinc finger