PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PEQU_14013

Organism

Phalaenopsis equestris

Taxonomic ID

78828

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis

Family

NAC

Protein Properties

Length: 192aa MW: 21701.8 Da PI: 8.9918

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PEQU_14013	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	166.1	1.2e-51	13	140	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgel 99 ppGfrFhPtd+el+ +yLkkkv+++ + +++i+e+d+yk+ Pw+Lp+k+ +e+ew+fFs+rd+ky++g r+nra+ sgyWkatg+d+++l+ + + PEQU_14013 13 PPGFRFHPTDQELIIHYLKKKVTASLPHSSSIIAELDLYKYSPWELPEKAVFGEEEWFFFSPRDRKYPNGVRPNRAAGSGYWKATGTDRPILEIgGAQC 111 9********************999888899***********8777899**********************************9945566 PP NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128 g+kk Lvfykgr pkg+ktdWvmheyrl PEQU_14013 112 LGVKKALVFYKGRPPKGTKTDWVMHEYRL 140 9************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	3.27E-57	5	145	IPR003441	NAC domain
PROSITE profile	PS51005	54.723	12	162	IPR003441	NAC domain
Pfam	PF02365	1.2E-27	13	140	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 192 aa Download sequence Send to blast
MELSYPFPCP QFPPGFRFHP TDQELIIHYL KKKVTASLPH SSSIIAELDL YKYSPWELPE 60 KAVFGEEEWF FFSPRDRKYP NGVRPNRAAG SGYWKATGTD RPILEIGGAQ CLGVKKALVF 120 YKGRPPKGTK TDWVMHEYRL LNSLAPTQSQ KQKGSMQVSF TISSSGGLDG FNLDHVEVVF 180 GFNLDHVQVV FG

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
1ut4_A	3e-59	6	141	11	143	NO APICAL MERISTEM PROTEIN
1ut4_B	3e-59	6	141	11	143	NO APICAL MERISTEM PROTEIN
1ut7_A	3e-59	6	141	11	143	NO APICAL MERISTEM PROTEIN
1ut7_B	3e-59	6	141	11	143	NO APICAL MERISTEM PROTEIN
3swm_A	3e-59	6	141	14	146	NAC domain-containing protein 19
3swm_B	3e-59	6	141	14	146	NAC domain-containing protein 19
3swm_C	3e-59	6	141	14	146	NAC domain-containing protein 19
3swm_D	3e-59	6	141	14	146	NAC domain-containing protein 19
3swp_A	3e-59	6	141	14	146	NAC domain-containing protein 19
3swp_B	3e-59	6	141	14	146	NAC domain-containing protein 19
3swp_C	3e-59	6	141	14	146	NAC domain-containing protein 19
3swp_D	3e-59	6	141	14	146	NAC domain-containing protein 19
4dul_A	3e-59	6	141	11	143	NAC domain-containing protein 19
4dul_B	3e-59	6	141	11	143	NAC domain-containing protein 19
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Functional Description ? help Back to Top
Source	Description
UniProt	Transcription factor of the NAC family associated with male fertility. {ECO:0000250}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020573389.1	1e-114	NAC transcription factor 32-like
Swissprot	A2YMR0	4e-69	NAC10_ORYSI; NAC transcription factor ONAC010
TrEMBL	A0A2I0WZP8	1e-87	A0A2I0WZP8_9ASPA; NAC transcription factor ONAC010
STRING	XP_008782049.1	9e-82	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP13797	19	29

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G61110.1	4e-69	NAC domain containing protein 25