PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_14118
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family TALE
Protein Properties Length: 172aa    MW: 20363.3 Da    PI: 11.1446
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_14118genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox22.71.6e-071251572254
                 SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
    Homeobox  22 nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                 ++ ps   +  LA+++gL+ +qV++WF N R +
  PEQU_14118 125 HPDPSDIGKHILARQTGLSRSQVSNWFINARVR 157
                 56666667778********************98 PP
2BELL69.27.7e-231611272
        BELL 12 LlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72
                L+ ++++V++rYk+y+ q++ ++ sFea ag ++a+pY +lA k +S+hFr Lkd i++qi
  PEQU_14118  1 LVLIMKQVKRRYKRYRWQMRSLVWSFEALAGGDAATPYLALACKVMSKHFRRLKDGITKQI 61
                566889******************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF075266.8E-19158IPR006563POX domain
SMARTSM003894.9E-4102165IPR001356Homeobox domain
SuperFamilySSF466892.14E-13113168IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.0E-21115168IPR009057Homeodomain-like
CDDcd000861.02E-6115161No hitNo description
PfamPF059201.5E-14118157IPR008422Homeobox KN domain
PROSITE profilePS500719.912120161IPR001356Homeobox domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 172 aa     Download sequence    Send to blast
LVLIMKQVKR RYKRYRWQMR SLVWSFEALA GGDAATPYLA LACKVMSKHF RRLKDGITKQ  60
IKRLMKVVRD KIHLVPCKLL GQCFQQSKGF QIKGFMMDQQ PWKTHRVLPE PSVSLRAWLF  120
AHFLHPDPSD IGKHILARQT GLSRSQVSNW FINARVRLWK PLIEEMYMEE IK
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that establishes leaf shape by repressing growth in specific subdomains of the leaf. Negatively regulates knox homeobox gene KNAT1/BP expression.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020585688.11e-124LOW QUALITY PROTEIN: BEL1-like homeodomain protein 4
SwissprotQ9SW807e-54BLH2_ARATH; BEL1-like homeodomain protein 2
TrEMBLA0A2I0X8173e-67A0A2I0X817_9ASPA; Homeobox protein BEL1 like
STRINGGLYMA11G02450.13e-63(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP77153146
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36870.23e-56BEL1-like homeodomain 2
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]