PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_14314
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family Trihelix
Protein Properties Length: 258aa    MW: 29713.8 Da    PI: 10.6229
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_14314genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix45.61.8e-1422110186
    trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                 +W++ e+  L++a  ++  +l+rg+l++++W+ev++++       r   r+ +qCk++++ l+k+yk +k   +++    +s+++++++l+
  PEQU_14314  22 CWSEGETSMLVDAWGDRYLELNRGNLRQKQWQEVADAVnarpgGGRRPPRTDVQCKNRIDTLKKKYKIEKSKISDG--AFVSQWAFYSRLD 110
                 7*************************************88655445557899*******************99997..78889*****997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138376.0E-2620111No hitNo description
Gene3DG3DSA:1.10.10.609.7E-42386IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 258 aa     Download sequence    Send to blast
MEGRDAAPAR PPNPAMPYRE DCWSEGETSM LVDAWGDRYL ELNRGNLRQK QWQEVADAVN  60
ARPGGGRRPP RTDVQCKNRI DTLKKKYKIE KSKISDGAFV SQWAFYSRLD MLIGSSVSAK  120
KPPSSPPLAL PLPSHRKGLP DSRSSSRSSR SSMERSGSSR EKSGRGWKKG RERSDRDGIR  180
ELARAIERFA EIYEKVEGDK QRQMIELEKQ RMEFIKGLEF QRMQMFVDTQ VQMEKIKRIR  240
RSDSGERLSL SALSFFYF
Functional Description ? help Back to Top
Source Description
UniProtTranscription regulator that may repress the maturation program during early embryogenesis. {ECO:0000269|PubMed:21330492}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020705771.11e-108trihelix transcription factor ASIL2
SwissprotQ9LJG88e-37ASIL2_ARATH; Trihelix transcription factor ASIL2
TrEMBLA0A2I0WAG71e-108A0A2I0WAG7_9ASPA; Uncharacterized protein
TrEMBLM0SWZ51e-108M0SWZ5_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr5P09160_0011e-109(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP20653279
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G14180.12e-27sequence-specific DNA binding transcription factors