PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PEQU_14700

Organism

Phalaenopsis equestris

Taxonomic ID

78828

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis

Family

Protein Properties

Length: 93aa MW: 10745.5 Da PI: 7.5114

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PEQU_14700	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	47.6	3e-15	7	87	17	95
E--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-....TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEE CS B3 17 vlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvlt....kGWkeFvkangLkegDfvvFkldgr.sefelvvk 95 ++p +fa +h + ++++ l++ + + W+vk++++ s++ lt kGW++Fv++n L+egD ++F l+++ +e l v+ PEQU_14700 7 IFPSDFAVKHlRLR---PQKIFLRH-QDKMWSVKYKFEVASNGGSLTglsgKGWRRFVEDNALCEGDGCIFVLSESeKEMVLDVH 87 579999996444...44688777.8899*9955555534444445*******************9975455545555 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50863	12.379	1	92	IPR003340	B3 DNA binding domain
SMART	SM01019	8.4E-5	4	92	IPR003340	B3 DNA binding domain
SuperFamily	SSF101936	6.87E-15	7	91	IPR015300	DNA-binding pseudobarrel domain
CDD	cd10017	1.63E-11	7	90	No hit	No description
Pfam	PF02362	2.5E-12	7	86	IPR003340	B3 DNA binding domain
Gene3D	G3DSA:2.40.330.10	4.4E-15	8	90	IPR015300	DNA-binding pseudobarrel domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 93 aa Download sequence Send to blast
MIYILQIFPS DFAVKHLRLR PQKIFLRHQD KMWSVKYKFE VASNGGSLTG LSGKGWRRFV 60 EDNALCEGDG CIFVLSESEK EMVLDVHIVR VDD

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020690296.2	6e-38	B3 domain-containing protein Os12g0592300
Refseq	XP_028550059.1	6e-38	B3 domain-containing protein Os12g0592300
Refseq	XP_028550060.1	6e-38	B3 domain-containing protein Os12g0592300
TrEMBL	A0A2I0X103	2e-38	A0A2I0X103_9ASPA; B3 domain-containing protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP585	31	172

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G33280.1	1e-09	B3 family protein