PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_14701
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family B3
Protein Properties Length: 185aa    MW: 21348.2 Da    PI: 4.516
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_14701genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B349.95.8e-1611733399
                -SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
          B3 33 sktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99
                   +tle +sg++W v++  +  +++++l +GWkeFv+an ++egD + F++ g+s+f   v +f+ 
  PEQU_14701 11 AEVITLEGPSGNQWPVRF--SYIGDHIYLNEGWKEFVEANYVEEGDCLAFEYCGSSCF--SVLIFDP 73
                4469**************..777788****************************9***..9999885 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5086314.424174IPR003340B3 DNA binding domain
CDDcd100178.46E-17272No hitNo description
SuperFamilySSF1019361.29E-20576IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.101.9E-19676IPR015300DNA-binding pseudobarrel domain
SMARTSM010191.4E-4774IPR003340B3 DNA binding domain
PfamPF023621.9E-131172IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 185 aa     Download sequence    Send to blast
MNFMMNFEQL AEVITLEGPS GNQWPVRFSY IGDHIYLNEG WKEFVEANYV EEGDCLAFEY  60
CGSSCFSVLI FDPSGCEREA SYFARIMNPI PAKGCQAEEK RDNQVPDVPR FSSPRLPCVD  120
NSPMQLVSNY EKSSAFNVKF DGRRFGMRSS APNDENNYGD LFHNLLLIKR PFGIFFVFVF  180
YFCFF
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020586230.11e-116B3 domain-containing protein Os03g0622100-like isoform X1
RefseqXP_020586232.11e-116B3 domain-containing protein Os03g0622100-like isoform X1
RefseqXP_020586233.11e-116B3 domain-containing protein Os03g0622100-like isoform X1
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP56234179
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18960.18e-19B3 family protein