PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_14723
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family Trihelix
Protein Properties Length: 250aa    MW: 28467.9 Da    PI: 10.6384
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_14723genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix59.96.4e-1944127186
    trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                 +W+ + +laLi+a+ +++++l+rg+l++ +W++v++++     ++  + ++++qC++k+e+l+kry+ +k+++       s  + yf++++
  PEQU_14723  44 CWSYEDTLALIDAYGDKWHSLGRGNLRASHWDDVAAAVarecpSSSAVPKTSVQCRHKIEKLRKRYRSEKQRSLF-----S--WLYFRKMD 127
                 7*************************************99999999**********************9987664.....3..88888887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138374.1E-2043129No hitNo description
SMARTSM005953.5E-652134IPR006578MADF domain
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    Send to blast
MASASPSSSA AAGATASPAA SPFPFPAVPP RSLPHSSRRF PPPCWSYEDT LALIDAYGDK  60
WHSLGRGNLR ASHWDDVAAA VARECPSSSA VPKTSVQCRH KIEKLRKRYR SEKQRSLFSW  120
LYFRKMDAME RGAAAAEEAG LRFTIPKAVR SKLVGFRPSP RAAIKPVLEE MRRRVEEKRM  180
KMRRNDDGIR DVASALGIFG EEFFRMEQMK VDVSREMEKM RMEMELKRTE MILDCQRQIV  240
ETMVHRFMGK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020582007.10.0trihelix transcription factor ASIL1
TrEMBLA0A2I0VRV31e-111A0A2I0VRV3_9ASPA; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP56893250
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44730.16e-38Trihelix family protein