PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PEQU_14799

Organism

Phalaenopsis equestris

Taxonomic ID

78828

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis

Family

Dof

Protein Properties

Length: 206aa MW: 22168.7 Da PI: 9.7081

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PEQU_14799	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	127.2	4.7e-40	6	67	2	63
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63 ke+al+cprC+stntkfCyynnyslsqPryfCk+CrryWt+GG+lrnvPvGgg+rknk+sss PEQU_14799 6 KEQALNCPRCNSTNTKFCYYNNYSLSQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRSSS 67 6899******************************************************9875 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	8.0E-30	2	64	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	4.3E-34	8	64	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	29.264	10	64	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	12	48	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 206 aa Download sequence Send to blast
RVRPHKEQAL NCPRCNSTNT KFCYYNNYSL SQPRYFCKTC RRYWTEGGSL RNVPVGGGSR 60 KNKRSSSSSS NSVPTPTFTS SSTPKTTLPS SSSTNLQPSH QHMIHGVETS KFCQGGGHDL 120 NLSFASAHDS VSALELLRSG ISARGMGTFV PGSVFGAGFG FQELMRPVSD GMKLHPLDGV 180 GGTSGYGGSM QGEGDGRLLF PFEDLK

Functional Description ? help Back to Top
Source	Description
UniProt	Transcription factor specifically involved in the maternal control of seed germination. Regulates transcription by binding to a 5'-AA[AG]G-3' consensus core sequence. May ensure the inactivity of a component that would be activated to trigger germination as a consequence of red light perception.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020581985.1	1e-151	dof zinc finger protein DOF1.8-like, partial
Swissprot	Q43385	3e-44	DOF37_ARATH; Dof zinc finger protein DOF3.7
TrEMBL	A0A2I0X643	8e-76	A0A2I0X643_9ASPA; Dof zinc finger protein DOF3.7
STRING	GSMUA_Achr4P27160_001	4e-60	(Musa acuminata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2369	34	86

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G61850.3	6e-40	Dof family protein