PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_14919
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family MYB
Protein Properties Length: 245aa    MW: 28342.6 Da    PI: 5.2371
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_14919genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding56.56.2e-181461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEd++l+ +++ +G g+W++ ++  g+ R++k+c++rw +yl
       PEQU_14919 14 KGPWTAEEDQILISYIQNHGHGNWRALPKLAGLLRCGKSCRLRWTNYL 61
                     79******************************99************97 PP
2Myb_DNA-binding52.21.4e-1667112148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg++T eE++ +++++++lG++ W++Ia++++ gRt++++k+ w+++l
       PEQU_14919  67 RGNFTREEEDAIINLHQMLGNR-WSAIAAKLP-GRTDNEIKNVWHTHL 112
                      89********************.*********.************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.604.0E-26564IPR009057Homeodomain-like
PROSITE profilePS5129416.976961IPR017930Myb domain
SuperFamilySSF466892.15E-3110108IPR009057Homeodomain-like
SMARTSM007173.5E-141363IPR001005SANT/Myb domain
PfamPF002491.7E-161461IPR001005SANT/Myb domain
CDDcd001673.88E-101661No hitNo description
PROSITE profilePS5129425.17662116IPR017930Myb domain
Gene3DG3DSA:1.10.10.601.5E-2665116IPR009057Homeodomain-like
SMARTSM007171.2E-1466114IPR001005SANT/Myb domain
PfamPF002494.4E-1567112IPR001005SANT/Myb domain
CDDcd001671.29E-969112No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009651Biological Processresponse to salt stress
GO:0009723Biological Processresponse to ethylene
GO:0009733Biological Processresponse to auxin
GO:0009751Biological Processresponse to salicylic acid
GO:0009753Biological Processresponse to jasmonic acid
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    Send to blast
MVRAPCCEKM GLKKGPWTAE EDQILISYIQ NHGHGNWRAL PKLAGLLRCG KSCRLRWTNY  60
LRPDIKRGNF TREEEDAIIN LHQMLGNRWS AIAAKLPGRT DNEIKNVWHT HLKKRLTRTD  120
KETGQERIRK TQIEPKEEMP TQSYSSTPEP SSSSSTVDNS QNSMESFSHE AEAQGIDESF  180
WTEVLKMDSN DEYYCNSSDS MAMEGFNSSD FSYDKFWLSA GVREEDDDLS FWLRIFLQAE  240
EFPQI
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1a5j_A1e-27121165108B-MYB
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that regulates freezing tolerance by affecting expression of CBF genes. {ECO:0000269|PubMed:24415840}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by salicylic acid (SA), jasmonic acid (JA), salt (NaCl), ethylene and auxin (IAA) (PubMed:16463103). Down-regulated by cold treatment (PubMed:24415840). {ECO:0000269|PubMed:16463103, ECO:0000269|PubMed:24415840}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020584868.10.0myb-related protein Myb4-like
SwissprotQ9SJX81e-81MYB14_ARATH; Transcription factor MYB14
TrEMBLA0A455LAC81e-130A0A455LAC8_9ASPA; Myb-related protein Myb4-like protein
STRINGXP_008235684.13e-88(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP7938563
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31180.12e-81myb domain protein 14
Publications ? help Back to Top
  1. Chen Y, et al.
    AtMYB14 Regulates Cold Tolerance in Arabidopsis.
    Plant Mol. Biol. Rep., 2013. 31: p. 87-97
    [PMID:24415840]