PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_14970
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family C2H2
Protein Properties Length: 236aa    MW: 26408 Da    PI: 7.9282
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_14970genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.30.001187109123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 ++C dC+k+Fs++  L  H  +H
  PEQU_14970  87 HQCRDCNKCFSSHQALGGHRVSH 109
                 79************999888777 PP
2zf-C2H212.20.00055184206123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 +kC  C + Fs+   L  H+r+H
  PEQU_14970 184 HKCWVCEMEFSSGQALGGHMRKH 206
                 79********************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576676.37E-686109No hitNo description
PfamPF139121.4E-486111IPR007087Zinc finger, C2H2
SMARTSM00355187109IPR015880Zinc finger, C2H2-like
PROSITE profilePS501579.97287114IPR007087Zinc finger, C2H2
PROSITE patternPS00028089109IPR007087Zinc finger, C2H2
SuperFamilySSF576676.37E-6179206No hitNo description
SMARTSM003550.083184206IPR015880Zinc finger, C2H2-like
PfamPF139124.9E-9184208IPR007087Zinc finger, C2H2
PROSITE patternPS000280186206IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    Send to blast
MEESTKVKGK RTKRKRNHLL PPVVSSILSS TPSVEISESI TEEEEDTANC LLLFVGGRYN  60
PKPNEMDEAN MAVNITSQQC KAGNNVHQCR DCNKCFSSHQ ALGGHRVSHN KKSRLSIPLV  120
SEAMNVNSIQ LSINSFSSPA TIEVKIHKCW VCEMEFSSEV MNVNSIQLSI NSFSSPATIE  180
VKIHKCWVCE MEFSSGQALG GHMRKHRPPT STEPTNKKEN FKRFYLDLNL PPPCDD
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020592811.11e-126zinc finger protein ZAT5-like
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP20133285
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28200.11e-22C2H2 family protein