PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_14971
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family C2H2
Protein Properties Length: 199aa    MW: 22228.3 Da    PI: 8.4947
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_14971genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H210.70.001787109123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 ++C dC+++Fs++  L  H  +H
  PEQU_14971  87 HQCRDCNMCFSSHQALGGHRASH 109
                 79**************9999888 PP
2zf-C2H214.69.5e-05147169123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 +kC  C k Fs+   L  H+r+H
  PEQU_14971 147 HKCWVCEKEFSSGQALGGHMRKH 169
                 79********************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576678.46E-886109No hitNo description
PfamPF139122.0E-486111IPR007087Zinc finger, C2H2
SMARTSM003551.187109IPR015880Zinc finger, C2H2-like
PROSITE profilePS501578.82987114IPR007087Zinc finger, C2H2
PROSITE patternPS00028089109IPR007087Zinc finger, C2H2
SuperFamilySSF576678.46E-8142169No hitNo description
Gene3DG3DSA:3.30.160.602.8E-4145169IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
PfamPF139123.5E-10146170IPR007087Zinc finger, C2H2
SMARTSM003550.037147169IPR015880Zinc finger, C2H2-like
PROSITE profilePS501579.12147169IPR007087Zinc finger, C2H2
PROSITE patternPS000280149169IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 199 aa     Download sequence    Send to blast
MEESTKLKGK RTKRKRNHLL PPIVSSILSP TPSAEISEST TEEEEDMANC LLLLAEGGYN  60
PKPNEMDEAT TAVNMTSRQY NAGNNVHQCR DCNMCFSSHQ ALGGHRASHN KKLKLSIPLV  120
SEVMNVNSIQ LSINSFSSPA KIEVKTHKCW VCEKEFSSGQ ALGGHMRKHR LPTSAESTKK  180
KENFKRFYLD LNLPPPCDD
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020592842.11e-148zinc finger protein ZAT5-like
STRINGXP_008779116.12e-43(Phoenix dactylifera)
STRINGXP_008787454.11e-43(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP20133285
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28200.12e-26C2H2 family protein